Insight
Nov 28, 2025
Mackisen

WHAT PENALTIES APPLY FOR LATE GST/QST FILING OR PAYMENT?

Filing or paying your GST/QST late can cause more than just administrative headaches. Revenue Québec automatically applies penalties, interest charges, and account flags even when a delay is unintentional. Many business owners underestimate the consequences of missing these deadlines, leading to compounding charges and increased audit scrutiny. This guide explains all the penalties that apply for late GST/QST filing or payment, how they are calculated, and how to avoid them.
Understanding the cost of late compliance helps protect your business and maintain clean financial standing.
LEGAL AND REGULATORY FRAMEWORK
Late-filing and late-payment penalties arise from:
• Excise Tax Act (GST)
• Quebec Taxation Act (QST)
Under these laws, businesses must:
• file returns by the assigned deadline
• remit taxes collected by the due date
• maintain proper documentation
• correct errors promptly
If a return or payment is late, penalties and interest apply automatically.
KEY COURT DECISIONS
Courts consistently uphold GST/QST late penalties, confirming that:
• penalties apply even when delays were accidental
• bookkeeping errors are not valid excuses
• financial difficulty does not remove liability
• interest is mandatory and cannot be forgiven except in limited circumstances
• taxpayers must actively manage filing deadlines
Judges also confirm that “I didn’t know” or “My accountant was late” is not a defense.
WHY REVENU QUÉBEC ENFORCES PENALTIES STRICTLY
Revenue Québec applies penalties to:
• encourage timely compliance
• prevent businesses from using tax money as working capital
• maintain consistent reporting
• reduce audit risk
• ensure fairness across taxpayers
Businesses with repeated late filings or payments are flagged for additional monitoring.
WHAT PENALTIES APPLY FOR LATE GST/QST FILING OR PAYMENT?
Here is the full breakdown.
1. Late-Filing Penalty
This penalty applies when the GST/QST return is filed after the deadline.
Penalty:
A percentage of the amount owing on the return, typically increasing with the length of the delay.
Even if you owe zero tax, repeated late filings raise audit risk.
2. Late-Payment Penalty
If you file on time but pay late, Revenue Québec applies a separate penalty.
This applies when:
• the return was filed
but
• the remittance was made after the due date
Penalties accumulate until the balance is fully paid.
3. Daily Interest Charges
Interest begins accruing the day after the due date on:
• unpaid GST/QST
• unpaid penalties
Interest is compounded daily, making delays expensive.
4. Penalties for Missing Returns (Mandatory Estimates)
If you do not file a return, Revenue Québec may issue a default assessment an estimated tax bill.
You must still:
• file the missing return
• pay the estimated amount
• pay penalties
• pay interest
5. Refund Hold or Denial
If your account shows any late filings or unpaid balances, Revenue Québec may:
• freeze your refund
• request additional documentation
• apply your refund to prior balances
• delay payments for months
Refunds will not be released until every outstanding issue is resolved.
6. Repeated Late Penalty (Pattern of Non-Compliance)
Businesses with multiple late filings may receive:
• additional penalties
• audit selection
• higher scrutiny
• compliance monitoring
• interest charges from past reinstatements
7. Collection Measures for Serious Delays
If GST/QST remains unpaid for a long period, Revenue Québec may take enforcement actions:
• garnishment of bank accounts
• seizure of refunds
• freezing accounts
• personal liability for directors in some cases
• liens on property
These actions escalate quickly when returns are significantly overdue.
COMMON MISTAKES THAT TRIGGER PENALTIES
Businesses often get penalized because they:
• rely on bookkeeping done months late
• forget to reconcile GST/QST monthly
• assume “filing late is no big deal”
• wait for refunds before filing
• ignore letters from Revenue Québec
• misunderstand their filing frequency
• let multiple periods pile up
These issues compound costs and delay compliance.
HOW TO AVOID GST/QST LATE PENALTIES
Follow these best practices:
• set calendar reminders for all filing deadlines
• reconcile GST/QST monthly
• maintain clean documentation
• submit returns before the due date
• pay amounts owing immediately
• have backups for bookkeeping staff
• automate tax tracking in accounting software
• enroll in notifications via Mon Dossier
WHAT TO DO IF YOU ALREADY FILED OR PAID LATE
Steps to take:
File the return immediately
Pay outstanding amounts
Review prior periods for errors
Request penalty relief if eligible
Implement a filing system to prevent recurrence
A CPA can determine whether you qualify for taxpayer relief.
MACKISEN STRATEGY
Mackisen CPA helps businesses avoid, manage, and resolve late-filing GST/QST penalties. We:
• catch up on missing periods
• reconcile GST/QST accounts
• file corrected returns
• negotiate with Revenue Québec
• determine eligibility for penalty relief
• implement filing systems and controls
Our proactive approach restores compliance and protects your business from escalation.
REAL CLIENT EXPERIENCE
A startup missed three quarterly filings. Mackisen completed all returns, arranged payments, and reduced penalties.
A retailer failed to remit QST on time due to cash flow problems. Mackisen built a tax reserve system that prevented future delays.
A contractor filed late repeatedly. Mackisen implemented a monthly reconciliation routine and eliminated penalties going forward.
COMMON QUESTIONS
Can penalties be removed?
Sometimes but relief is limited. A CPA can assess eligibility.
What if I have no sales?
You must still file. Nil returns are required.
Does interest stop when I file?
No. Interest stops only when the full balance is paid.
Will late filing trigger an audit?
Possibly especially if repeated.
WHY MACKISEN
With more than 35 years of combined CPA experience, Mackisen CPA Montreal helps Quebec businesses avoid penalties, stay compliant, and correct late GST/QST filings quickly. Our systems keep your account clean and audit ready.

